wyckoff position
Space Group Equivariant Crystal Diffusion
Chang, Rees, Pak, Angela, Guerra, Alex, Zhan, Ni, Richardson, Nick, Ertekin, Elif, Adams, Ryan P.
Accelerating inverse design of crystalline materials with generative models has significant implications for a range of technologies. Unlike other atomic systems, 3D crystals are invariant to discrete groups of isometries called the space groups. Crucially, these space group symmetries are known to heavily influence materials properties. We propose SGEquiDiff, a crystal generative model which naturally handles space group constraints with space group invariant likelihoods. SGEquiD-iff consists of an SE(3)-invariant, telescoping discrete sampler of crystal lattices; permutation-invariant, transformer-based autoregressive sampling of Wyckoff positions, elements, and numbers of symmetrically unique atoms; and space group equivariant diffusion of atomic coordinates. We show that space group equivariant vector fields automatically live in the tangent spaces of the Wyckoff positions. SGEquiDiff achieves state-of-the-art performance on standard benchmark datasets as assessed by quantitative proxy metrics and quantum mechanical calculations. Our code is available at https://github.com/rees-c/sgequidiff.
- North America > United States > Illinois (0.04)
- South America > Chile > Santiago Metropolitan Region > Santiago Province > Santiago (0.04)
- Europe > Austria > Vienna (0.04)
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Space Group Conditional Flow Matching
Puny, Omri, Lipman, Yaron, Miller, Benjamin Kurt
Inorganic crystals are periodic, highly-symmetric arrangements of atoms in three-dimensional space. Their structures are constrained by the symmetry operations of a crystallographic \emph{space group} and restricted to lie in specific affine subspaces known as \emph{Wyckoff positions}. The frequency an atom appears in the crystal and its rough positioning are determined by its Wyckoff position. Most generative models that predict atomic coordinates overlook these symmetry constraints, leading to unrealistically high populations of proposed crystals exhibiting limited symmetry. We introduce Space Group Conditional Flow Matching, a novel generative framework that samples significantly closer to the target population of highly-symmetric, stable crystals. We achieve this by conditioning the entire generation process on a given space group and set of Wyckoff positions; specifically, we define a conditionally symmetric noise base distribution and a group-conditioned, equivariant, parametric vector field that restricts the motion of atoms to their initial Wyckoff position. Our form of group-conditioned equivariance is achieved using an efficient reformulation of \emph{group averaging} tailored for symmetric crystals. Importantly, it reduces the computational overhead of symmetrization to a negligible level. We achieve state of the art results on crystal structure prediction and de novo generation benchmarks. We also perform relevant ablations.
- Europe > United Kingdom > North Sea > Southern North Sea (0.04)
- South America > Chile > Santiago Metropolitan Region > Santiago Province > Santiago (0.04)
- Europe > Austria > Vienna (0.04)
- Research Report (1.00)
- Overview (0.67)
CrystalICL: Enabling In-Context Learning for Crystal Generation
Wang, Ruobing, Tan, Qiaoyu, Wang, Yili, Wang, Ying, Wang, Xin
Designing crystal materials with desired physicochemical properties remains a fundamental challenge in materials science. While large language models (LLMs) have demonstrated strong in-context learning (ICL) capabilities, existing LLM-based crystal generation approaches are limited to zero-shot scenarios and are unable to benefit from few-shot scenarios. In contrast, human experts typically design new materials by modifying relevant known structures which aligns closely with the few-shot ICL paradigm. Motivated by this, we propose CrystalICL, a novel model designed for few-shot crystal generation. Specifically, we introduce a space-group based crystal tokenization method, which effectively reduces the complexity of modeling crystal symmetry in LLMs. We further introduce a condition-structure aware hybrid instruction tuning framework and a multi-task instruction tuning strategy, enabling the model to better exploit ICL by capturing structure-property relationships from limited data. Extensive experiments on four crystal generation benchmarks demonstrate the superiority of CrystalICL over the leading baseline methods on conditional and unconditional generation tasks.
- Europe > Austria > Vienna (0.14)
- Africa > Togo (0.04)
- North America > United States > Louisiana > Orleans Parish > New Orleans (0.04)
- Asia > China > Shanghai > Shanghai (0.04)
CLOUD: A Scalable and Physics-Informed Foundation Model for Crystal Representation Learning
Xu, Changwen, Zhu, Shang, Viswanathan, Venkatasubramanian
The prediction of crystal properties is essential for understanding structure-property relationships and accelerating the discovery of functional materials. However, conventional approaches relying on experimental measurements or density functional theory (DFT) calculations are often resource-intensive, limiting their scalability. Machine learning (ML) models offer a promising alternative by learning complex structure-property relationships from data, enabling faster predictions. Yet, existing ML models often rely on labeled data, adopt representations that poorly capture essential structural characteristics, and lack integration with physical principles--factors that limit their generalizability and interpretability. Here, we introduce CLOUD (Crystal Language mOdel for Unified and Differentiable materials modeling), a transformer-based framework trained on a novel Symmetry-Consistent Ordered Parameter Encoding (SCOPE) that encodes crystal symmetry, Wyckoff positions, and composition in a compact, coordinate-free string representation. Pre-trained on over six million crystal structures, CLOUD is fine-tuned on multiple downstream tasks and achieves competitive performance in predicting a wide range of material properties, demonstrating strong scaling performance. Furthermore, as proof of concept of differentiable materials modeling, CLOUD is applied to predict the phonon internal energy and heat capacity, which integrates the Debye model to preserve thermodynamic consistency. The CLOUD-DEBYE framework enforces thermodynamic consistency and enables temperature-dependent property prediction without requiring additional data. These results demonstrate the potential of CLOUD as a scalable and physics-informed foundation model for crystalline materials, unifying symmetry-consistent representations with physically grounded learning for property prediction and materials discovery.
- North America > United States > Michigan (0.04)
- North America > United States > District of Columbia > Washington (0.04)
- North America > United States > New York (0.04)
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- Energy > Energy Storage (0.46)
- Health & Medicine > Pharmaceuticals & Biotechnology (0.45)
Wyckoff Transformer: Generation of Symmetric Crystals
Kazeev, Nikita, Nong, Wei, Romanov, Ignat, Zhu, Ruiming, Ustyuzhanin, Andrey, Yamazaki, Shuya, Hippalgaonkar, Kedar
Symmetry rules that atoms obey when they bond together to form an ordered crystal play a fundamental role in determining their physical, chemical, and electronic properties such as electrical and thermal conductivity, optical and polarization behavior, and mechanical strength. Almost all known crystalline materials have internal symmetry. Consistently generating stable crystal structures is still an open challenge, specifically because such symmetry rules are not accounted for. To address this issue, we propose WyFormer, a generative model for materials conditioned on space group symmetry. We use Wyckoff positions as the basis for an elegant, compressed, and discrete structure representation. To model the distribution, we develop a permutation-invariant autoregressive model based on the Transformer and an absence of positional encoding. WyFormer has a unique and powerful synergy of attributes, proven by extensive experimentation: best-in-class symmetry-conditioned generation, physics-motivated inductive bias, competitive stability of the generated structures, competitive material property prediction quality, and unparalleled inference speed.
- Asia (0.14)
- North America > Canada (0.14)
- Europe > Russia (0.14)
Symmetry-Aware Bayesian Flow Networks for Crystal Generation
Ruple, Laura, Torresi, Luca, Schopmans, Henrik, Friederich, Pascal
The discovery of new crystalline materials is essential to scientific and technological progress. However, traditional trial-and-error approaches are inefficient due to the vast search space. Recent advancements in machine learning have enabled generative models to predict new stable materials by incorporating structural symmetries and to condition the generation on desired properties. In this work, we introduce SymmBFN, a novel symmetry-aware Bayesian Flow Network (BFN) for crystalline material generation that accurately reproduces the distribution of space groups found in experimentally observed crystals. SymmBFN substantially improves efficiency, generating stable structures at least 50 times faster than the next-best method. Furthermore, we demonstrate its capability for property-conditioned generation, enabling the design of materials with tailored properties. Our findings establish BFNs as an effective tool for accelerating the discovery of crystalline materials.
- Europe > Germany > Baden-Württemberg > Karlsruhe Region > Karlsruhe (0.05)
- North America > United States > New York (0.04)
WyckoffDiff - A Generative Diffusion Model for Crystal Symmetry
Kelvinius, Filip Ekström, Andersson, Oskar B., Parackal, Abhijith S., Qian, Dong, Armiento, Rickard, Lindsten, Fredrik
Crystalline materials often exhibit a high level of symmetry. However, most generative models do not account for symmetry, but rather model each atom without any constraints on its position or element. We propose a generative model, Wyckoff Diffusion (WyckoffDiff), which generates symmetry-based descriptions of crystals. This is enabled by considering a crystal structure representation that encodes all symmetry, and we design a novel neural network architecture which enables using this representation inside a discrete generative model framework. In addition to respecting symmetry by construction, the discrete nature of our model enables fast generation. We additionally present a new metric, Fr\'echet Wrenformer Distance, which captures the symmetry aspects of the materials generated, and we benchmark WyckoffDiff against recently proposed generative models for crystal generation.
- Europe > Sweden > Östergötland County > Linköping (0.04)
- Europe > United Kingdom > England > Oxfordshire > Oxford (0.04)
- Europe > Netherlands > South Holland > Dordrecht (0.04)
SymmCD: Symmetry-Preserving Crystal Generation with Diffusion Models
Levy, Daniel, Panigrahi, Siba Smarak, Kaba, Sékou-Oumar, Zhu, Qiang, Lee, Kin Long Kelvin, Galkin, Mikhail, Miret, Santiago, Ravanbakhsh, Siamak
Generating novel crystalline materials has potential to lead to advancements in fields such as electronics, energy storage, and catalysis. The defining characteristic of crystals is their symmetry, which plays a central role in determining their physical properties. However, existing crystal generation methods either fail to generate materials that display the symmetries of real-world crystals, or simply replicate the symmetry information from examples in a database. To address this limitation, we propose SymmCD, a novel diffusion-based generative model that explicitly incorporates crystallographic symmetry into the generative process. We decompose crystals into two components and learn their joint distribution through diffusion: 1) the asymmetric unit, the smallest subset of the crystal which can generate the whole crystal through symmetry transformations, and; 2) the symmetry transformations needed to be applied to each atom in the asymmetric unit. We also use a novel and interpretable representation for these transformations, enabling generalization across different crystallographic symmetry groups. We showcase the competitive performance of SymmCD on a subset of the Materials Project, obtaining diverse and valid crystals with realistic symmetries and predicted properties.
- South America > Chile > Santiago Metropolitan Region > Santiago Province > Santiago (0.05)
- Africa > Togo (0.04)
- North America > United States > North Carolina (0.04)
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Discovery of 2D Materials via Symmetry-Constrained Diffusion Model
Xu, Shihang, Chu, Shibing, Mrad, Rami, Zhang, Zhejun, Li, Zhelin, Jiao, Runxian, Chen, Yuanping
Generative model for 2D materials has shown significant promise in accelerating the material discovery process. The stability and performance of these materials are strongly influenced by their underlying symmetry. However, existing generative models for 2D materials often neglect symmetry constraints, which limits both the diversity and quality of the generated structures. Here, we introduce a symmetry-constrained diffusion model (SCDM) that integrates space group symmetry into the generative process. By incorporating Wyckoff positions, the model ensures adherence to symmetry principles, leading to the generation of 2,000 candidate structures. DFT calculations were conducted to evaluate the convex hull energies of these structures after structural relaxation. From the generated samples, 843 materials that met the energy stability criteria (Ehull < 0.6 eV/atom) were identified. Among these, six candidates were selected for further stability analysis, including phonon band structure evaluations and electronic properties investigations, all of which exhibited phonon spectrum stability. To benchmark the performance of SCDM, a symmetry-unconstrained diffusion model was also evaluated via crystal structure prediction model. The results highlight that incorporating symmetry constraints enhances the effectiveness of generated 2D materials, making a contribution to the discovery of 2D materials through generative modeling.
Crystal Structure Generation Based On Material Properties
Huang, Chao, Chen, JiaHui, Liang, HongRui, Chen, ChunYan, Chen, Chen
The discovery of new materials is very important to the field of materials science. When researchers explore new materials, they often have expected performance requirements for their crystal structure. In recent years, data-driven methods have made great progress in the direction plane of crystal structure generation, but there is still a lack of methods that can effectively map material properties to crystal structure. In this paper, we propose a Crystal DiT model to generate the crystal structure from the expected material properties by embedding the material properties and combining the symmetry information predicted by the large language model. Experimental verification shows that our proposed method has good performance.
- Europe > Austria > Vienna (0.14)
- Asia > China > Zhejiang Province > Ningbo (0.04)
- Asia > Middle East > Jordan (0.04)
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- Information Technology > Artificial Intelligence > Representation & Reasoning (1.00)
- Information Technology > Artificial Intelligence > Natural Language > Large Language Model (1.00)
- Information Technology > Artificial Intelligence > Vision (0.94)
- Information Technology > Artificial Intelligence > Machine Learning > Neural Networks > Deep Learning (0.46)